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| View Original: | Wu-UPGMA-Tree-Acanthobasidium-Aleurodiscus-Neoaleurodiscus.svg (133x128) | |||
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| Keywords: Wu-UPGMA-Tree-Acanthobasidium-Aleurodiscus-Neoaleurodiscus.svg Figure Evolutionary relationships of Acanthobasidium Aleurodiscus s s and Neoaleurodiscus The evolutionary history was inferred using the UPGMA method 1 The optimal tree with the sum of branch length 0 27259509 is shown The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test 1000 replicates are shown next to the branches Only Bootstrap values more than 50 are shown 2 The tree is drawn to scale with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree The evolutionary distances were computed using the Kimura 2-parameter method 3 and are in the units of the number of base substitutions per site The analysis involved 19 nucleotide sequences All positions with less than 95 site coverage were eliminated That is fewer than 5 alignment gaps missing data and ambiguous bases were allowed at any position There were a total of 812 positions in the final dataset Evolutionary analyses were conducted in MEGA6 4 <br/> For all taxa the GenBank number of the DNA-sequence is shown For the tree the same sequences are used which Sheng-Hua Wu used for his most parsimonious tree 5<br/> <br/> 1 Sneath P H A and Sokal R R 1973 Numerical Taxonomy Freeman San Francisco <br/> 2 Felsenstein J 1985 Confidence limits on phylogenies An approach using the bootstrap Evolution 39 783-791 <br/> 3 Kimura M 1980 A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences Journal of Molecular Evolution 16 111-120 <br/> 4 Tamura K Stecher G Peterson D Filipski A and Kumar S 2013 MEGA6 Molecular Evolutionary Genetics Analysis version 6 0 Molecular Biology and Evolution30 2725-2729 <br/> 5 Sheng-Hua Wu Dong-Mei Wang Shi-Yi Yu Neoaleurodiscus fujii a new genus and new species found at the timberline in Japan In The Mycological Society of America Hrsg Mycologia Vol 102 1 Lawrence 2010 S 217 “223<br/> ; List with GenBank Sequences http //www ncbi nlm nih gov/nuccore/AY039326 Aleurodiscus grantii strain T569 http //www ncbi nlm nih gov/nuccore/AY039312 Aleurodiscus amorphus strain HHB15282 http //www ncbi nlm nih gov/nuccore/AF506397 Aleurodiscus amorphus - AF506397 http //www ncbi nlm nih gov/nuccore/AY039315 Acanthobasicium penicillatum strain T322 http //www ncbi nlm nih gov/nuccore/AY039322 Aleurodiscus weirii strain HHB12678 http //www ncbi nlm nih gov/nuccore/AY039328 Acanthobasidium norvegicum strain T623 http //www ncbi nlm nih gov/nuccore/AY039317 Acanthobasidium aurantius strain T621 http //www ncbi nlm nih gov/nuccore/FJ799924 Neoaleurodiscus fujii strain Wu0807-41 http //www ncbi nlm nih gov/nuccore/FJ799923 Neoaleurodiscus fujii strain Wu0807-40 http //www ncbi nlm nih gov/nuccore/AF506445 Gloeodontia discolor AF506445 http //www ncbi nlm nih gov/nuccore/AF506446 Gloeodontia pyramidata AF506446 http //www ncbi nlm nih gov/nuccore/AY039333 Acanthofungus rimosus AY039333 http //www ncbi nlm nih gov/nuccore/AY039311 Stereum rugosum AY039311 http //www ncbi nlm nih gov/nuccore/AY039319 Acanthophysium lividocaeruleum AY039319 http //www ncbi nlm nih gov/nuccore/AY039307 Xylobolus frustulatus AY039307 http //www ncbi nlm nih gov/nuccore/AY039310 Acanthophysium cerussatum AY039310 http //www ncbi nlm nih gov/nuccore/AY039331 Aleurobotrys botryosus AY039331 http //www ncbi nlm nih gov/nuccore/AF506438 Gloeocystidiopsis aff flamma AF506438 http //www ncbi nlm nih gov/nuccore/AY039332 Aleurodiscus mirabilis AY039332 http //www ncbi nlm nih gov/nuccore/AY039306 Aleurodiscus oakesii AY039306 http //www ncbi nlm nih gov/nuccore/AF506420 Megalocystidium leucoxanthum AF506420 own 2014-08-19 Thkgk Cc-zero Acanthobasidium Aleurodiscus penicillatus Aleurodiscus Neoaleurodiscus | ||||
